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for any point source'discharge of a pollutant to surface waters. In California, waste discharge <br /> requirements issued by a Regional Water Quality Control Board or the State Board for point <br /> source discharges to surface waters serve as the NPDES permits required by the Clean Water <br /> Act. (Wat. Code §§ 13370 and 13377.) Water quality standards governing allowable discharges <br /> are contained in statewide and regional water quality control plans, which designate beneficial <br /> uses of specified water bodies and establish water quality objectives to protect those uses, and in <br /> federal criteria promulgated by the U. S. Environmental Protection Agency(USEPA) and <br /> applicable in California. Discharges to the San Joaquin River are subject to the provisions of the <br /> Water Quality Control Plan for Sacramento River and San Joaquin River Basins (Basin Plan).' <br /> The City's permit contains limitations consistent with these requirements. <br /> The beneficial uses of water in the San Joaquin River and Delta downstream of <br /> the City's point of discharge are municipal and domestic supply, agricultural irrigation, <br /> agricultural stock watering, industrial process and industrial service supply water, contact <br /> recreation, other non-contact water recreation, warm freshwater aquatic habitat, cold freshwater <br /> aquatic habitat, warm fish migration habitat, cold fish migration habitat,warm spawning habitat, <br /> wildlife habitat, and navigation.' In order to protect the beneficial uses of water identified in the <br /> Basin Plan, the permit issued to the City establishes effluent limitations for numerous <br /> constituents that are contained in the City's treated effluent. The City's petition challenges the <br /> effluent limitations for eight of the regulated constituents, as well as other provisions of the <br /> permit. The City's contentions generally concern the following five subjects: <br /> (1) the Regional Board's use of the water quality objectives established in the <br /> Basin Plan in determining effluent limitations specified in the permit; <br /> (2) limitations on the total discharge of iron and manganese, which the City <br /> contends do not properly account for the relationship between total discharge of the constituents <br /> and the dissolved concentrations of the constituents for which numeric objectives are established <br /> in the Basin Plan; <br /> ' A"point source"is"any discernible,confined and discrete conveyance"such as a pipe, ditch, channel,tunnel, <br /> conduit or well. (33 U.S.C. § 1362(14).) <br /> ' Water Quality Control Plan, Fourth Edition,for the Sacramento and San Joaquin River Basins. Order No.R5- <br /> 2004-0028 identifies various other laws,plans,and policies that apply to discharges under the City's permit. <br /> ' Basin Plan,Table II-1. <br /> 3. <br />